Whole Genome Multi-Locus Sequence Typing Web-Server
If you have run the wgMLST 1.0 program before and would like to Run the Whole Genome Multi-Locus Sequence Analysis with an exiting wgMLST scheme that was generated previously.
If you have selected Yes in the above option then Upload the scheme folder that was generated in the previous run of wgMLST 1.0 program
Upload Scheme Files
Please Upload Reference Genome (.gbk or .ffn files accepted)
Please upload a text file listing the genomes (just their file names) to be analyzed. Please provide the file names of each genome in this text file. Remember to put each genome file name on a single line.
Please upload genomes to be analysed, You need to zip all your genome files into one and Upload here (in ZIP format only)
Upload Genome Files
Parameters: 1. Minimum coverage of alignment to define an allele sequence (Default = 100)
2. Minimum coverage of alignment to define a truncated allele sequence (Default = 50).
Should be Empty: